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EDP03315 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03315" - Paf1 complex component in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03315Paf1 complex component (656 aa)    
Predicted Functional Partners:
EDO98741
Paf1 complex component (106 aa)
     
  0.991
EDP09315
High mobility group protein (552 aa)
     
  0.989
EDP00621
Paf1 complex component (502 aa)
     
  0.987
EDP04357
Paf1 complex component (973 aa)
     
  0.987
EDP07463
Paf1 complex component (396 aa)
     
  0.984
EDO96685
Global transcription factor (1054 aa)
     
  0.983
EDP09795
Global transcription factor (1188 aa)
     
  0.982
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
       
  0.900
EDO97438
Casein kinase 2 alpha chain, CK2A (339 aa)
     
      0.863
EDP09581
Predicted protein (68 aa)
     
      0.851
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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