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EDP03318 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03318" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03318Predicted protein (188 aa)    
Predicted Functional Partners:
EDP04921
Predicted protein (633 aa)
     
  0.990
EDP02976
Predicted protein (714 aa)
     
  0.968
EDO95996
MSH2-like protein (221 aa)
     
 
  0.908
EDP01005
Predicted protein (594 aa)
       
 
  0.905
POLZ1
DNA polymerase zeta (729 aa)
     
  0.899
EDP02417
Predicted protein (135 aa)
       
  0.889
EDP06305
Predicted protein (119 aa)
     
  0.816
FEN1
Nuclease, Rad2 family; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as [...] (396 aa)
     
  0.795
EDO98646
Predicted protein (231 aa)
       
  0.790
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
  0.788
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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