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EDP03345 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03345" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03345Predicted protein (258 aa)    
Predicted Functional Partners:
EDO98606
Predicted protein (100 aa)
   
          0.508
EDP08112
SOUL3-like protein (232 aa)
   
          0.493
EDP02985
Predicted protein (382 aa)
   
          0.469
EDP08490
Predicted protein (283 aa)
   
          0.468
PLAP2
Plastid lipid associated protein (347 aa)
   
          0.464
CPLD18
Predicted protein (346 aa)
   
          0.450
PLAP8
Plastid lipid associated protein (320 aa)
   
          0.431
EDP08491
Predicted protein (72 aa)
   
          0.427
EDP04127
Predicted protein (125 aa)
   
          0.409
RCA1
Rubisco activase (408 aa)
   
          0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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