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DCA1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DCA1" - S-adenosylmethionine decarboxylase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCA1S-adenosylmethionine decarboxylase (390 aa)    
Predicted Functional Partners:
SPD1
Spermidine synthase (318 aa)
     
 
  0.983
METM
S-Adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (By similarity) (390 aa)
     
 
  0.904
EDP08645
cytosine-C5 specific DNA methyltransferase (1263 aa)
         
    0.900
DMT1
cytosine-C5 specific DNA methyltransferase (1333 aa)
         
    0.900
EDP08097
cytosine-C5 specific DNA methyltransferase (2204 aa)
         
    0.900
EDP01750
cytosine-C5 specific DNA methyltransferase (1663 aa)
         
    0.900
SPS1
Spermine synthase (375 aa)
     
 
  0.675
EDO97553
Predicted protein (259 aa)
       
 
  0.621
EDP04737
Predicted protein (143 aa)
       
      0.621
COX17
Cytochrome c oxidase assembly protein (81 aa)
           
  0.576
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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