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EDP03427 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03427" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03427Predicted protein (103 aa)    
Predicted Functional Partners:
SMP1
Small nuclear ribonucleoprotein (127 aa)
     
  0.919
SMP9
Small nuclear ribonucleoprotein Sm D1 (114 aa)
     
    0.906
SMP3
Small nuclear ribonucleoprotein E (87 aa)
     
    0.844
EDP03428
Predicted protein (127 aa)
         
    0.800
SMP4
Small nuclear ribonucleoprotein Sm D2 (110 aa)
     
    0.772
EDP06119
Protein arginine N-methyltransferase (215 aa)
     
  0.759
SMP6A
U6 small ribonucleoprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (89 aa)
     
    0.716
LSM5
Sm-E protein (95 aa)
     
    0.713
LSM2
Sm-D1 protein (93 aa)
     
    0.710
SMPF
Small nuclear riboprotein F; Probable common Sm protein, is found in U1 and U2 snRNPs and may be part of the spliceosome (85 aa)
     
    0.656
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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