STRINGSTRING
CCB2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CCB2" - Protein required for cyt b6 assembly in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCB2Protein required for cyt b6 assembly (310 aa)    
Predicted Functional Partners:
CCB1
CPLD51 protein required for cyt b6 assembly (269 aa)
     
   
  0.884
CCB4
CGLD23 protein required for cyt b6 assembly (306 aa)
   
   
  0.883
CCB3
CPLD43 protein required for cyt b6 assembly (193 aa)
     
   
  0.824
PPR3
Protein with PPR repeats (160 aa)
           
  0.710
CCS1
C-type cytochrome synthesis 1; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment (398 aa)
   
   
  0.615
EDO97139
Predicted protein (112 aa)
   
          0.514
TGD2
Permease-like component of an ABC transporter (278 aa)
   
          0.510
EDP08491
Predicted protein (72 aa)
   
          0.505
PLAP2
Plastid lipid associated protein (347 aa)
   
          0.505
EDP04127
Predicted protein (125 aa)
   
          0.502
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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