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EDP03523 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03523" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03523Predicted protein (177 aa)    
Predicted Functional Partners:
EDO97016
Predicted protein (164 aa)
     
        0.509
COPB1
Beta-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (959 aa)
     
        0.480
EDP08333
Predicted protein (427 aa)
     
        0.477
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
        0.476
EDO98112
Predicted protein (619 aa)
     
        0.476
SEC24B
COP-II coat subunit (1080 aa)
     
        0.475
COG3
Component of oligomeric golgi complex 3 (805 aa)
     
        0.475
BHSD1
Steroid dehydrogenase (401 aa)
     
        0.428
COG7
Component of oligomeric golgi complex 7 (758 aa)
     
        0.426
EDP03164
Predicted protein (257 aa)
     
        0.423
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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