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DAL1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DAL1" - Allantoinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DAL1Allantoinase (512 aa)    
Predicted Functional Partners:
PYR2
Aspartate carbamoyltransferase (272 aa)
   
  0.988
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
 
  0.970
CMPL1
Carbamoyl phosphate synthase, large subunit (1075 aa)
   
  0.961
EDO98474
Predicted protein (315 aa)
 
 
  0.952
TBA1
psbA translation factor (431 aa)
 
  0.936
PYR4
Dihydropryrimidine dehydrogenase (387 aa)
   
  0.919
EDP00988
AIR synthase-related protein (1403 aa)
   
   
  0.919
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
  0.910
CMPS1
Carbamoyl phosphate synthase, small subunit (461 aa)
   
  0.903
UOX
Urate oxidase II; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin (208 aa)
 
     
  0.881
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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