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EDP03531 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03531" - DEAD box RNA helicase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03531DEAD box RNA helicase (407 aa)    
Predicted Functional Partners:
EDO98904
Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
 
  0.988
EDO96263
Predicted protein (494 aa)
     
        0.983
EDP00658
Predicted protein (328 aa)
     
 
  0.963
EDP03582
Predicted protein (380 aa)
   
 
  0.958
MGO1
Mago nashi-like protein (148 aa)
     
  0.958
EDP03276
Predicted protein (944 aa)
     
 
  0.947
EDP03165
Predicted protein (330 aa)
     
 
  0.939
BLP1
Bystin-like protein (248 aa)
     
 
  0.938
EDP05150
Predicted protein (254 aa)
     
 
  0.935
EDP00683
Predicted protein (516 aa)
   
 
0.932
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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