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HEM4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"HEM4" - uroporphyrinogen-III synthase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEM4uroporphyrinogen-III synthase (95 aa)    
Predicted Functional Partners:
EDO99391
Sirohydrochlorin ferrochelatase, SIRB (234 aa)
   
 
  0.879
NAR5
Nitrate transporter (628 aa)
   
   
  0.862
NII1
Nitrite reductase (589 aa)
   
   
  0.836
NAR4
High affinity nitrate transporter (527 aa)
   
   
  0.812
EDP00897
Predicted protein (531 aa)
   
   
  0.804
NFR1
NADPH-dependent flavin reductase; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Transfers electrons from NADPH to the Fe-S cluster of the anamorsin/DRE2 homolog (620 aa)
   
   
  0.790
EDO99985
Predicted protein (404 aa)
   
   
  0.784
ALAD
Delta-aminolevulinic acid dehydratase (390 aa)
     
  0.767
PBGD2
Porphobilinogen deaminase (380 aa)
 
   
  0.750
PBGD1
Porphobilinogen deaminase (349 aa)
 
   
  0.748
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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