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EDP03543 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03543" - RabGAP/TBC protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03543RabGAP/TBC protein (302 aa)    
Predicted Functional Partners:
RABG1
Small rab-related GTPase (206 aa)
       
 
  0.776
EDP08094
Predicted protein (2076 aa)
     
  0.670
RABE1
Small rab-related GTPase (218 aa)
       
  0.616
EDP04562
Predicted protein; Golgi membrane protein involved in vesicular trafficking (191 aa)
     
      0.611
ATP15
F1F0 ATP synthase epsilon subunit (75 aa)
       
      0.597
EDP07977
ARF-like GTPase ARLP3 (392 aa)
     
  0.547
ARL5
Small ARF-related GTPase (182 aa)
     
  0.547
BBS3A
ARF-like small GTPase (177 aa)
     
  0.547
CGL49
ARF/SAR superfamily small monomeric GTP binding protein (186 aa)
     
  0.547
ARFA1A
Small ARF-related GTPase (181 aa)
     
  0.547
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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