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CGL44 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL44" - RabGAP/TBC protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL44RabGAP/TBC protein (318 aa)    
Predicted Functional Partners:
RABG1
Small rab-related GTPase (206 aa)
       
 
  0.776
EDP08094
Predicted protein (2076 aa)
     
  0.765
EDP07236
Predicted protein (144 aa)
     
  0.685
VPS5C
Subunit of retromer complex (747 aa)
     
  0.632
RABE1
Small rab-related GTPase (218 aa)
       
  0.616
EDP04562
Predicted protein; Golgi membrane protein involved in vesicular trafficking (191 aa)
     
      0.611
EDP09660
Predicted protein (318 aa)
     
 
  0.601
ATP15
F1F0 ATP synthase epsilon subunit (75 aa)
       
      0.597
EDP07916
Predicted protein (411 aa)
     
 
    0.578
ARL5
Small ARF-related GTPase (182 aa)
     
  0.562
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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