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EDP03600 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03600" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03600Predicted protein (111 aa)    
Predicted Functional Partners:
EDO99649
Predicted protein (95 aa)
     
        0.653
EDP02210
Predicted protein (208 aa)
     
        0.524
ATPvE
Vacuolar ATP synthase subunit E (232 aa)
     
        0.517
HON2
Histone H1 (232 aa)
     
        0.514
EDP02684
Predicted protein (80 aa)
     
        0.505
EDP09318
Predicted protein (710 aa)
     
        0.475
EDP06185
Predicted protein (185 aa)
     
        0.475
MRPL17
Mitochondrial ribosomal protein L17 (136 aa)
     
        0.423
EDP01202
Predicted protein (263 aa)
     
        0.414
CBP20
Nuclear cap-binding protein (143 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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