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RPL13 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RPL13" - Ribosomal protein L13 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPL13Ribosomal protein L13 (218 aa)    
Predicted Functional Partners:
RPL21
Ribosomal protein L21 (163 aa)
     
  0.999
RPL4
Ribosomal protein L4 (410 aa)
     
  0.999
RPL11
Ribosomal protein L11 (178 aa)
     
  0.999
RPL35
Ribosomal protein L35 (130 aa)
     
  0.999
RPP0
Acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10 (320 aa)
     
  0.999
RPL30
Ribosomal protein L30 (110 aa)
     
  0.999
RPL36
Ribosomal protein L36, component of cytosolic 80S ribosome and 60S large subunit (98 aa)
     
  0.999
RPS3
Ribosomal protein S3 (230 aa)
     
  0.999
RPL14
Ribosomal protein L14 (137 aa)
     
  0.999
RPL27a
Ribosomal protein L27a (147 aa)
     
    0.999
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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