STRINGSTRING
NIK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NIK1" - Nickel transporter in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIK1Nickel transporter (242 aa)    
Predicted Functional Partners:
MST1
Mastigoneme-like flagellar protein (1987 aa)
           
  0.712
ZRT2
Zinc-nutrition responsive transporter (745 aa)
           
  0.711
CUTC
Copper homeostasis protein cutC (269 aa)
           
  0.711
ZRT5
Zinc-nutrition responsive transporter (323 aa)
           
  0.711
EDO96919
Predicted protein (379 aa)
           
  0.710
SHKD1
Dehydroquinate dehydratase (554 aa)
     
        0.686
EDP05168
Predicted protein (539 aa)
     
        0.685
EDO98760
Predicted protein (1455 aa)
     
        0.683
EDP03593
Predicted protein (462 aa)
     
        0.673
CGL74
Predicted protein (350 aa)
     
        0.665
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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