STRINGSTRING
SSA19 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SSA19" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSA19Predicted protein (595 aa)    
Predicted Functional Partners:
EDO99218
Predicted protein (645 aa)
     
        0.720
EDP06626
Predicted protein (825 aa)
     
        0.704
EDP05096
Predicted protein (237 aa)
     
        0.695
EDP01094
Predicted protein (91 aa)
     
        0.695
CGL4
Predicted protein (433 aa)
     
        0.692
EDP05368
Predicted protein (505 aa)
     
        0.691
EDP00797
Predicted protein (375 aa)
     
        0.689
ALK3
Aurora-like kinase (718 aa)
     
        0.689
EDP08367
Hydroxyproline-rich glycoprotein (612 aa)
     
        0.686
EDP04825
Predicted protein (245 aa)
     
        0.685
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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