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EDP03829 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03829" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03829Predicted protein (481 aa)    
Predicted Functional Partners:
EDP06964
Predicted protein (464 aa)
     
        0.654
EDP06669
Predicted protein (310 aa)
     
        0.609
EFG5
Elongation factor EF-Tu-like protein (989 aa)
     
        0.599
EDP05271
RNA processing protein (511 aa)
     
        0.595
TIC22
22 kDa translocon at the inner membrane of chloroplasts (310 aa)
     
        0.582
SRP68
Subunit of the signal recognition particle (699 aa)
     
        0.558
PRP39
Nuclear pre-mRNA splicing factor and U1 snRNP component (476 aa)
     
        0.523
EDO97992
Predicted protein (720 aa)
     
        0.519
EDP05167
Predicted protein (1378 aa)
     
        0.518
EDO96850
Predicted protein (786 aa)
     
        0.516
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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