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EDP03879 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03879" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03879Predicted protein (449 aa)    
Predicted Functional Partners:
MYG1
MYG1/GAMM1-like protein (324 aa)
   
      0.604
DUR1
Urea carboxylase (1251 aa)
   
   
  0.601
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
   
  0.547
EDP06926
Predicted protein (796 aa)
   
 
  0.543
MAP1A
Methionine aminopeptidase (383 aa)
   
   
  0.534
MAP1D
Methionine aminopeptidase (337 aa)
   
   
  0.534
MAP2
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (510 aa)
   
   
  0.534
EDO98981
Predicted protein (387 aa)
   
   
  0.534
PIN4
Peptidyl-prolyl cis-trans isomerase, parvulin-type (255 aa)
   
   
  0.528
SRP35
SR protein factor (338 aa)
     
      0.519
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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