STRINGSTRING
INFB protein (Chlamydomonas reinhardtii) - STRING interaction network
"INFB" - Organellar translation initiation factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INFBOrganellar translation initiation factor (373 aa)    
Predicted Functional Partners:
EDO98179
Predicted protein (101 aa)
   
  0.935
INFA
Organellar translation initiation factor (67 aa)
     
  0.904
EIF1A
Eukaryotic initiation factor (141 aa)
     
  0.898
PRPS5
Plastid ribosomal protein S5 (673 aa)
     
  0.880
RPS3
Ribosomal protein S3 (230 aa)
     
  0.877
rps3
Ribosomal protein S3 (712 aa)
     
  0.877
RPS2
Ribosomal protein S2 (274 aa)
     
  0.872
RPS18
Ribosomal protein S18 (153 aa)
     
  0.852
EDP01101
Predicted protein (879 aa)
   
   
  0.846
rps2-1
Ribosomal protein S2 (570 aa)
   
  0.838
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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