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EDP03946 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03946" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03946Predicted protein (96 aa)    
Predicted Functional Partners:
MGO1
Mago nashi-like protein (148 aa)
     
  0.981
RBM8A
RNA binding motif protein (144 aa)
     
  0.968
EIF4G
Eukaryotic initiation factor (797 aa)
     
  0.959
EDP05842
DEAD/DEAH box helicase-related protein (496 aa)
   
  0.957
EDP04765
Predicted protein (266 aa)
     
  0.957
UPF3
UPF3 protein (371 aa)
       
  0.944
EDP00683
Predicted protein (516 aa)
   
 
  0.942
UAP56
Subunit of exon junction complex (435 aa)
   
  0.931
EDP09358
Predicted protein (530 aa)
   
  0.929
CWC22
Cwc22 pre-mRNA splicing factor (592 aa)
     
  0.919
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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