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EDP03978 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP03978" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP03978Predicted protein (1009 aa)    
Predicted Functional Partners:
EDO96832
Predicted protein (189 aa)
     
        0.524
EDP03443
valyl-tRNA synthetase (574 aa)
     
        0.522
EDP02496
Predicted protein (226 aa)
     
        0.475
DNJ5
DnaJ-like protein (432 aa)
     
        0.467
EDP06397
Predicted protein (285 aa)
           
  0.463
EDP06396
Predicted protein (183 aa)
           
  0.463
EDP02954
Predicted protein (633 aa)
     
   
  0.450
EDP06926
Predicted protein (796 aa)
     
        0.445
EDP05113
Predicted protein (730 aa)
     
        0.428
TRZ1
Nuclear RNase Z (335 aa)
           
  0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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