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NPSN1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NPSN1" - Qb-SNARE protein, NPSN-family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPSN1Qb-SNARE protein, NPSN-family (316 aa)    
Predicted Functional Partners:
VAMP72
R-SNARE protein, VAMP72-family (219 aa)
     
 
  0.919
VAMP71
R-SNARE protein, VAMP72-family (218 aa)
     
 
  0.823
SYP5
Qc-SNARE protein, Syn8/Syntaxin8-family (243 aa)
           
  0.807
VPS4
AAA-ATPase of VPS4/SKD1 family (436 aa)
     
        0.587
SYP71
Qc-SNARE protein, SYP7-family (269 aa)
     
 
  0.514
EDO97226
Programmed cell death protein 6-interacting protein (801 aa)
     
        0.507
EDP09269
Predicted protein (548 aa)
     
        0.476
SNF7
Component of the ESCRT-III complex (222 aa)
     
        0.475
VPS2B
Subunit of the ESCRT-III complex (215 aa)
     
        0.475
SYP72
Qc-SNARE protein, SYP7-family (270 aa)
     
 
  0.409
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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