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EDP04008 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04008" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04008Predicted protein (329 aa)    
Predicted Functional Partners:
EDP05471
SNF2 superfamily protein (1061 aa)
     
        0.475
EDO98045
Predicted protein (320 aa)
     
        0.475
EDP03137
Predicted protein (494 aa)
     
        0.473
CUL1
Ubiquitin ligase SCF complex subunit cullin (725 aa)
     
        0.459
EDO99902
Predicted protein (440 aa)
     
      0.448
CUL2
Cullin (782 aa)
     
        0.448
CGL60
Predicted protein (457 aa)
     
      0.444
EDP01544
MYST family histone acetyltransferase (415 aa)
     
        0.426
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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