STRINGSTRING
EDP04036 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04036" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04036Predicted protein (203 aa)    
Predicted Functional Partners:
BBS4
Bardet biedl syndrome 4 protein (407 aa)
 
            0.722
EDP09679
Predicted protein (419 aa)
     
        0.652
CPLD50
Predicted protein (409 aa)
     
        0.572
EDO98865
Predicted protein (440 aa)
     
        0.526
EDP04764
Predicted protein (528 aa)
     
        0.522
EDP08974
Predicted protein (485 aa)
     
        0.520
EDP02970
Predicted protein (244 aa)
     
        0.518
EDP09414
Predicted protein (384 aa)
     
        0.516
EDP02636
Predicted protein (377 aa)
     
        0.513
EDP01288
Predicted protein (309 aa)
     
        0.506
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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