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EDP04083 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04083" - prolyl-tRNA synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04083prolyl-tRNA synthetase (411 aa)    
Predicted Functional Partners:
EDP00792
Cell wall protein (577 aa)
           
  0.806
EDP07462
Predicted protein (940 aa)
     
        0.680
EDP00253
Predicted protein (417 aa)
     
        0.666
EDP05784
Predicted protein (610 aa)
     
        0.655
NOP14
Nucleolar protein (1137 aa)
     
        0.654
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.651
EDP09704
Predicted protein (468 aa)
     
        0.649
EDP09123
Transcription factor (495 aa)
     
        0.641
EDP06674
Predicted protein (216 aa)
     
        0.628
EDP08920
Predicted protein (523 aa)
     
        0.627
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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