STRINGSTRING
EDP04116 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04116" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04116Predicted protein (361 aa)    
Predicted Functional Partners:
EDP09043
Predicted protein (1130 aa)
     
        0.618
EDP02391
Predicted protein (317 aa)
     
        0.580
EDP07426
Predicted protein (800 aa)
     
        0.517
EDP03613
Predicted protein (351 aa)
     
        0.513
EDP08817
Predicted protein (796 aa)
     
        0.504
EDP06858
Predicted protein (444 aa)
     
        0.504
EDP08882
Predicted protein (1002 aa)
     
        0.503
NUP155
Nuclear pore protein (868 aa)
     
        0.497
ELG29
Exostosin-like glycosyltransferase (947 aa)
     
        0.477
EDP09315
High mobility group protein (552 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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