STRINGSTRING
EDP04122 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04122" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04122Predicted protein (795 aa)    
Predicted Functional Partners:
EDP00488
Predicted protein (1737 aa)
     
        0.649
EDP00745
Predicted protein (273 aa)
     
        0.525
EDP07309
Histone methyltransferase (1735 aa)
     
        0.508
EDP00508
Predicted protein (748 aa)
     
        0.508
EDP08094
Predicted protein (2076 aa)
     
        0.506
FMO2
Flavin-containing monooxygenase (1149 aa)
     
        0.500
EDP04644
Predicted protein (567 aa)
     
        0.480
ERM10
ERD4-related membrane protein (1165 aa)
     
        0.478
EDP09923
Predicted protein (708 aa)
     
        0.475
EDP09167
Predicted protein (489 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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