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EDP04144 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04144" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04144Predicted protein (1362 aa)    
Predicted Functional Partners:
ATPvB
Vacuolar ATP synthase subunit B (504 aa)
     
 
  0.932
ATPvC
Vacuolar H+ ATPase V1 sector, subunit C (373 aa)
     
 
  0.908
ATPvA1
Vacuolar ATP synthase, subunit A (616 aa)
     
 
  0.893
SKP1
E3 ubiquitin ligase (157 aa)
       
 
  0.850
ATPvE
Vacuolar ATP synthase subunit E (232 aa)
       
 
  0.827
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
        0.723
POL1A
PolI-like DNA polymerase (498 aa)
     
        0.695
EDP00042
Predicted protein (801 aa)
     
        0.666
EDP00601
FAB-like protein, FYVE-domain PI-3,4-kinase (1269 aa)
     
   
  0.664
EDP04351
Predicted protein (1188 aa)
     
        0.654
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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