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EDP04161 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04161" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04161Predicted protein (721 aa)    
Predicted Functional Partners:
EDO96375
Predicted protein (544 aa)
     
        0.650
EDP02506
ATP-dependent DNA helicase (897 aa)
     
        0.626
EDP03175
Histone methyltransferase (1708 aa)
     
        0.611
EDP09871
Predicted protein (1378 aa)
     
        0.567
EDP03250
Predicted protein (803 aa)
     
        0.544
SMC5B
Structural maintenance of chromosomes protein 5B (1124 aa)
     
        0.537
EDP03953
Predicted protein (504 aa)
     
        0.520
EDP07457
Predicted protein (951 aa)
     
        0.519
EDP03406
Predicted protein (594 aa)
     
        0.519
EDP01070
Predicted protein (301 aa)
     
        0.516
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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