STRINGSTRING
CSA6 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CSA6" - Predicted protein of CSA family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSA6Predicted protein of CSA family (196 aa)    
Predicted Functional Partners:
EDP08714
Predicted protein (807 aa)
     
        0.548
PWR1
Predicted PWR protein (527 aa)
     
        0.546
EDP07786
Predicted protein (138 aa)
     
        0.520
EDP04923
Predicted protein (194 aa)
     
        0.501
DNL4
DNA ligase IV (831 aa)
     
        0.488
EDP08971
Predicted protein (362 aa)
     
        0.480
EDP01427
Predicted protein (918 aa)
     
        0.478
ANK15
Predicted protein (703 aa)
     
        0.477
Sat1
Serine acetyltransferase (392 aa)
     
        0.475
EDP06554
Predicted protein (1353 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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