STRINGSTRING
EDP04177 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04177" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04177Predicted protein (193 aa)    
Predicted Functional Partners:
MLH1
Mismatch repair protein (1007 aa)
 
 
  0.993
EDO95996
MSH2-like protein (221 aa)
   
  0.973
EDO97259
Predicted protein (294 aa)
   
  0.961
EDO99899
Predicted protein (86 aa)
   
  0.959
EDP02391
Predicted protein (317 aa)
   
  0.957
EDP01005
Predicted protein (594 aa)
   
  0.953
MSH1
DNA mismatch repair MutS protein (1041 aa)
   
  0.952
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
   
 
  0.933
EDO98728
Predicted protein (111 aa)
   
  0.923
EDO98148
Predicted protein (96 aa)
   
  0.916
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (4%) [HD]