STRINGSTRING
EDP04188 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04188" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04188Predicted protein (2283 aa)    
Predicted Functional Partners:
EDP06661
Predicted protein (1236 aa)
     
        0.506
EDP01994
Predicted protein (1159 aa)
     
        0.505
STPK15
Serine/threonine protein kinase 15 (329 aa)
     
        0.493
FMO2
Flavin-containing monooxygenase (1149 aa)
     
        0.480
EDO96801
Predicted protein (2261 aa)
     
        0.478
EDP07222
Hypothetical protein (1678 aa)
     
        0.475
STPK3
Serine/threonine protein kinase 3 (291 aa)
     
        0.475
TRP6
Transient receptor potential ion channel protein (2341 aa)
     
        0.475
EDO97968
Predicted protein (1673 aa)
     
        0.475
EDO97579
Predicted protein (785 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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