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EDP04197 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04197" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04197Predicted protein (260 aa)    
Predicted Functional Partners:
EDP03800
Predicted protein (169 aa)
     
        0.663
EDO99737
Predicted protein (168 aa)
     
        0.660
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
        0.649
EDP04239
Predicted protein (217 aa)
     
        0.636
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
        0.632
EDP06674
Predicted protein (216 aa)
     
        0.582
EDP07957
Predicted protein (1139 aa)
     
        0.568
EDP08688
Predicted protein (230 aa)
     
        0.558
EDP06045
Predicted protein (199 aa)
     
        0.546
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
        0.546
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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