STRINGSTRING
SPT1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SPT1" - Component of serine palmitoyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPT1Component of serine palmitoyltransferase (435 aa)    
Predicted Functional Partners:
SPT2
Serine palmitoyltransferase (333 aa)
   
0.997
EDP04696
Predicted protein (230 aa)
   
 
  0.949
SHMT3
Serine hydroxymethyltransferase 3; Interconversion of serine and glycine (487 aa)
       
  0.824
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine (520 aa)
       
  0.824
SHMT2
Serine hydroxymethyltransferase 2; Interconversion of serine and glycine (472 aa)
       
  0.824
THD1
Threonine deaminase (631 aa)
     
  0.819
STD1
Serine/threonine dehydratase (340 aa)
     
  0.819
MAA7
Tryptophan synthase beta subunit (448 aa)
       
  0.817
TSA1
Tryptophan synthetase alpha subunit (258 aa)
       
  0.817
EDP06376
Predicted protein (132 aa)
       
    0.801
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (5%) [HD]