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EDP04340 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04340" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04340Predicted protein (1529 aa)    
Predicted Functional Partners:
EDP07031
Predicted protein (476 aa)
     
        0.580
EDP03957
Predicted protein (625 aa)
     
        0.502
EDP01689
Predicted protein (399 aa)
     
        0.502
EDO97980
Predicted protein (456 aa)
     
        0.479
EDO99891
SNF2 superfamily protein (876 aa)
     
        0.475
EDO98499
Predicted protein (1092 aa)
     
        0.470
EDP00574
Cation/hydrogen exchanger, NhaP-type (589 aa)
     
        0.459
EDP09377
Predicted protein (336 aa)
     
        0.428
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.428
EDO98339
Predicted protein (717 aa)
     
        0.423
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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