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EDP04342 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04342" - DEAD/DEAH box helicase in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04342DEAD/DEAH box helicase (1992 aa)    
Predicted Functional Partners:
REV1
Deoxycytidyl transferase (764 aa)
     
      0.749
POLZ1
DNA polymerase zeta (729 aa)
     
 
  0.723
EDP05600
DNA topoisomerase-like protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (772 aa)
   
   
  0.714
EDP02417
Predicted protein (135 aa)
     
 
  0.706
EDP02014
Predicted protein (604 aa)
     
        0.555
EDP05419
Predicted protein (489 aa)
   
 
  0.540
EDP04113
Predicted protein (499 aa)
   
 
  0.540
RAD17
DNA damage checkpoint protein (1026 aa)
   
 
  0.528
EDO98655
Predicted protein (1513 aa)
     
      0.509
EDP05066
Predicted protein (1712 aa)
     
        0.505
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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