STRINGSTRING
EDP04358 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04358" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04358Predicted protein (536 aa)    
Predicted Functional Partners:
EDP02467
Predicted protein (434 aa)
     
        0.517
EDP01592
Predicted protein (844 aa)
     
        0.515
EDP08677
Predicted protein (1660 aa)
     
        0.513
EDP01555
Predicted protein (662 aa)
     
        0.510
LANC1
LanC lantibiotic synthetase component C-like protein (376 aa)
     
        0.510
EDP06315
Predicted protein (347 aa)
     
        0.509
EDP05644
3-ketoacyl-CoA-synthase (474 aa)
     
        0.509
EDP04698
High mobility group protein (200 aa)
     
        0.508
SMC1
Structural maintenance of chromosomes protein 1 (818 aa)
     
        0.508
EDO99294
Predicted protein (479 aa)
     
        0.507
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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