STRINGSTRING
SECY1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SECY1" - Preprotein translocase secY subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SECY1Preprotein translocase secY subunit (451 aa)    
Predicted Functional Partners:
PRPL24
Plastid ribosomal protein L24 (170 aa)
   
  0.973
AHD1
Bifunctional aspartate kinase/homoserine dehydrogenase (917 aa)
       
 
  0.973
PRPL18
Plastid ribosomal protein L18 (145 aa)
 
  0.972
RPL26
Ribosomal protein L26 (145 aa)
   
  0.971
EDP05885
Predicted protein (150 aa)
   
  0.971
RPL11
Ribosomal protein L11 (178 aa)
   
  0.967
rpl5
Ribosomal protein L5; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (187 aa)
   
  0.967
RPL23a
Ribosomal protein L23a (147 aa)
   
  0.961
rpl23
Ribosomal protein L23; Binds to 23S rRNA (95 aa)
   
  0.961
PRPS5
Plastid ribosomal protein S5 (673 aa)
   
 
  0.960
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (9%) [HD]