STRINGSTRING
EDP04394 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04394" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04394Predicted protein (358 aa)    
Predicted Functional Partners:
EDO99642
Predicted protein (737 aa)
     
        0.662
EDO96375
Predicted protein (544 aa)
     
        0.657
EDP05469
Predicted protein (1737 aa)
     
        0.656
BLD10
Basal body protein (1640 aa)
     
        0.655
EDP05708
Predicted protein (1901 aa)
     
        0.654
EDP03175
Histone methyltransferase (1708 aa)
     
        0.649
EDP04104
Predicted protein (271 aa)
     
        0.648
EDP05058
Predicted protein (1235 aa)
     
        0.647
EDP07254
Predicted protein (3707 aa)
     
        0.635
EDP07399
Predicted protein (2545 aa)
     
        0.624
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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