STRINGSTRING
RAD9 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RAD9" - DNA damage checkpoint protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD9DNA damage checkpoint protein (358 aa)    
Predicted Functional Partners:
HUS1
DNA damage checkpoint protein (277 aa)
     
  0.986
ATM1
DNA damage signaling kinase, ATM/TEL1-related (950 aa)
     
  0.934
RAD50
DNA repair protein (1410 aa)
     
 
  0.894
RAD17
DNA damage checkpoint protein (1026 aa)
     
  0.882
RAD51
DNA recombination protein (343 aa)
     
  0.850
ATR1
DNA damage-sensing protein kinase (3304 aa)
     
  0.845
PCN1
PCNA proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (268 aa)
     
 
  0.805
EDP04113
Predicted protein (499 aa)
     
  0.792
MRE11
MRE11 eukaryotic DNA repair protein (163 aa)
     
  0.774
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
     
  0.764
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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