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EDP04417 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04417" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04417Predicted protein (306 aa)    
Predicted Functional Partners:
ABH1
mRNA cap-binding protein (1134 aa)
     
 
  0.759
EDP06084
WD40 repeat protein (382 aa)
     
 
  0.692
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
        0.654
EDO98755
Predicted protein (1302 aa)
     
 
  0.651
DNJ19
DnaJ-like protein (482 aa)
     
   
  0.640
REF1
RNA export factor (137 aa)
     
 
  0.520
SSA7
Predicted protein (765 aa)
     
        0.502
LRG5
Predicted protein (681 aa)
     
        0.479
EDP06607
Predicted protein (939 aa)
     
        0.478
EDP00247
Predicted protein (1087 aa)
     
        0.478
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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