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EDP04418 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04418" - tRNA methyltransferase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04418tRNA methyltransferase (268 aa)    
Predicted Functional Partners:
EDP03165
Predicted protein (330 aa)
     
        0.792
EDO98904
Ribosome biogenesis pescadillo-like protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (678 aa)
     
        0.749
EDP07550
Predicted protein (281 aa)
     
        0.744
EDP01097
Predicted protein (181 aa)
     
        0.743
EDP04787
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (396 aa)
     
        0.739
TRM1
N2,N2-dimethylguanosine tRNA methyltransferase (410 aa)
     
   
  0.706
EDP06493
Predicted protein (341 aa)
     
   
  0.691
EDP03968
Predicted protein (319 aa)
     
        0.686
EDP03014
Predicted protein (343 aa)
     
   
  0.641
EDP09248
Predicted protein (211 aa)
     
        0.635
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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