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EDP04430 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04430" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04430Predicted protein (123 aa)    
Predicted Functional Partners:
SPLH2
DEAH-box nuclear pre-mRNA splicing factor (371 aa)
       
    0.854
EDP00676
Predicted protein (256 aa)
     
    0.825
SPL2
Splicing factor 3a, subunit 2 (287 aa)
     
    0.781
EDO99635
Predicted protein (683 aa)
     
 
    0.723
EDO98024
ATP-dependent RNA helicase (497 aa)
     
    0.707
EDP06159
Predicted protein (180 aa)
     
    0.704
MUT6
DEAH-box RNA helicase (1278 aa)
     
    0.701
SSA9
Predicted protein (1407 aa)
       
    0.692
EDO98025
Predicted protein (123 aa)
       
    0.692
EDP09724
Predicted protein (830 aa)
       
    0.690
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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