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EDP04433 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04433" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04433Predicted protein (482 aa)    
Predicted Functional Partners:
VSR1
Vacuolar sorting receptor (700 aa)
     
        0.487
EDO99164
Predicted protein (151 aa)
     
        0.476
EDP07031
Predicted protein (476 aa)
     
        0.475
EDP04644
Predicted protein (567 aa)
     
        0.475
EDP04338
Predicted protein (346 aa)
     
        0.475
EDP02199
Predicted protein (442 aa)
     
        0.475
EDO99902
Predicted protein (440 aa)
     
        0.475
EDO96914
Predicted protein (4653 aa)
     
        0.419
UBC8
Ubiquitin-protein ligase (1258 aa)
     
        0.406
EDP04521
CREB-binding protein (1156 aa)
     
        0.405
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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