STRINGSTRING
LHCA7 protein (Chlamydomonas reinhardtii) - STRING interaction network
"LHCA7" - Light-harvesting protein of photosystem I in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHCA7Light-harvesting protein of photosystem I (288 aa)    
Predicted Functional Partners:
LHCA8
Light-harvesting protein of photosystem I (243 aa)
     
 
0.938
LHCA9
Light-harvesting protein of photosystem I (213 aa)
     
 
0.927
PSAG
Photosystem I reaction center subunit V (125 aa)
     
   
  0.781
PSAO
Photosystem I subunit O (126 aa)
     
   
  0.770
LHCA3
Light-harvesting chlorophyll-a/b protein of photosystem I, type III (298 aa)
     
   
0.751
PSAK
Photosystem I reaction center subunit psaK (113 aa)
     
   
  0.714
LHCB4
Chlorophyll a-b binding protein of photosystem II (280 aa)
     
   
0.712
PSBP1
Oxygen-evolving enhancer protein 2 of photosystem II (282 aa)
     
   
  0.700
LHCBM7
Chlorophyll a-b binding protein of LHCII (249 aa)
     
   
0.691
LHCA1
Light-harvesting protein of photosystem I (239 aa)
     
   
0.677
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (7%) [HD]