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EDP04478 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04478" - RecA-like protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04478RecA-like protein (238 aa)    
Predicted Functional Partners:
DMC1
Rad51-like protein (343 aa)
   
  0.984
EDP08693
Predicted protein (1357 aa)
     
  0.953
RPA70B
Replication protein A, 70 kDa DNA-binding subunit (647 aa)
   
  0.928
RPA70A
Replication protein A, 70 kDa DNA-binding subunit (451 aa)
   
  0.928
EDO99505
Predicted protein (1212 aa)
     
  0.927
EDP04113
Predicted protein (499 aa)
     
  0.918
RAD50
DNA repair protein (1410 aa)
   
  0.910
EDP06099
ATP-dependent DNA helicase (330 aa)
     
  0.909
EDP05419
Predicted protein (489 aa)
     
  0.909
EDP05379
Predicted protein (73 aa)
     
  0.909
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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