STRINGSTRING
EDP04497 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04497" - Lysine N-methylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04497Lysine N-methylase (552 aa)    
Predicted Functional Partners:
EDO99966
Predicted protein (643 aa)
     
        0.667
EDP04508
Predicted protein (543 aa)
     
        0.575
EDP01282
acyl-CoA dehydrogenase (785 aa)
     
        0.545
CLR15
Predicted protein of CLR family (728 aa)
     
        0.538
EDP01826
Predicted protein (297 aa)
     
        0.518
EDP00435
Predicted protein (817 aa)
     
        0.518
EDP07576
Predicted protein (580 aa)
     
        0.516
EDP01646
Predicted protein (1093 aa)
     
        0.516
EDP00409
Predicted protein (862 aa)
     
        0.512
EDO99983
Predicted protein (471 aa)
     
        0.512
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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