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EDP04508 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04508" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04508Predicted protein (543 aa)    
Predicted Functional Partners:
UPF2
UPF2 protein (301 aa)
     
  0.838
EDO99256
Predicted protein (240 aa)
     
  0.811
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
   
  0.786
EDP05831
Predicted protein (156 aa)
     
  0.760
EDP00439
Predicted protein (225 aa)
     
  0.747
EDO99548
Predicted protein (261 aa)
     
  0.745
EDO99592
Predicted protein (1384 aa)
     
  0.738
EDP05936
chromodomain-helicase-DNA-binding protein (1219 aa)
   
  0.715
VPS34
VPS34-like PI-3-kinase (1098 aa)
     
  0.712
RAD17
DNA damage checkpoint protein (1026 aa)
   
  0.709
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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