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EDP04516 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04516" - SWI/SNF chromatin remodeling complex component in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04516SWI/SNF chromatin remodeling complex component (845 aa)    
Predicted Functional Partners:
RAD51
DNA recombination protein (343 aa)
   
 
  0.949
EDP06099
ATP-dependent DNA helicase (330 aa)
   
 
  0.937
EDP09315
High mobility group protein (552 aa)
     
  0.932
RECA
Chloroplast RecA recombination protein (415 aa)
   
 
  0.907
EDP04478
RecA-like protein (238 aa)
   
 
  0.907
EDP01238
Predicted protein (307 aa)
   
 
  0.906
EDP06286
Predicted protein (533 aa)
   
 
 
0.902
EDP03175
Histone methyltransferase (1708 aa)
     
  0.888
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
     
  0.886
EDP04113
Predicted protein (499 aa)
   
 
  0.864
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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