STRINGSTRING
EDP04540 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP04540" - Metal-dependent phosphohydrolase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP04540Metal-dependent phosphohydrolase (627 aa)    
Predicted Functional Partners:
EDP07552
Predicted protein (84 aa)
     
      0.882
EDP00409
Predicted protein (862 aa)
     
 
  0.826
EDP00261
Predicted protein (281 aa)
     
      0.612
EDO96710
Predicted protein (760 aa)
     
        0.611
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
        0.525
EDP09332
Predicted protein (702 aa)
     
        0.516
EDP09239
Hypothetical protein (667 aa)
     
        0.511
EDP05738
Predicted protein (512 aa)
     
        0.507
EDP04662
Predicted protein (596 aa)
     
        0.505
DNJ2
DnaJ-like protein (458 aa)
     
 
    0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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